Automatic whole cell organelle segmentation in volumetric electron microscopy
L. Heinrich, D. Bennett, D. Ackerman, W. Park, J. Bogovic, N. Eckstein, A. Petruncio, J. Clements, C. S. Xu, J. Funke, W. Korff, H. Hess, J. Lippincott-Schwartz, S. Saalfeld, A. Weigel, C. Project Team
The paper develops an automatic pipeline for segmenting and analyzing organelles in whole cells using FIB-SEM data, enabling quantification of spatial interactions and cross-modality registration.
bioRxiv · Nov 14, 2020 · PreprintCell Biology