Author

Amit Singh

University of Oklahoma

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Nagib AhsaniD· 2 shared Zhibo YangiD· 2 shared Zongkai PengiD· 2 shared Aayan Zarif· 1 shared Abdullah F Mallah· 1 shared Adam James Oliver· 1 shared Akbar Shoukat AliiD· 1 shared Albert Tran· 1 shared

Activity by Year

2025-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersCell Biology

Nagib AhsanORCID

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4 papers

Recent·Most cited

An endonuclease V protects Bacillus subtilis against a deaminase toxin and a uracil-containing phage

Adam James Oliver, Stephan Joseph, Amit Singh, Ali Riazuddin, Marcus Lopez, Yang Gao, David Bates, Marcos H. de Moraes

This study identifies EndoV as a DNA repair enzyme in Bacillus subtilis that protects against a deaminase toxin and a uracil-containing phage by repairing DNA lesions.

bioRxiv · Sep 30, 2026 · PreprintMicrobiology

A Non-canonical Role for Hepatocyte MLKL in Promoting Mitochondrial Dysfunction and Senescence in the Aging Liver

Sabira Mohammed, Chao Jiang, Travis Pennington, Shylesh Bhaskaran, Phoebe Ohene-Marfo, Kara F. Kneuper, Constantin Georgescu, Kamille Pitts, Albert Tran, Zongkai Peng, Amit Singh, Zhibo Yang, Tiangang Li, Bethany N. Hannafon, Courtney W. Houchen, , Sathyaseelan S. Deepa

This study shows that MLKL in hepatocytes promotes liver aging by inducing senescence and mitochondrial dysfunction without causing necroptosis.

Aging Cell · Jul 1, 2026Peer-reviewedCell Biology

Continual Learning for Emerging Epitope Landscapes in TCR peptide Binding Prediction

Amit Singh, Ayesha Ali, Deepak Yadav, John Jack

This paper introduces ContinualTCR, a continual learning framework for TCR peptide binding prediction that reduces catastrophic forgetting when adapting to new epitopes.

bioRxiv · Apr 23, 2026 · PreprintBioinformatics

Proteomic characterization of major fish allergy responsive protein parvalbumins in Hilsa (Tenualosa ilisha): A commercially important fish in Southeast Asia

Nazma Shaheen, Zongkai Peng, Amit Singh, Asfia Wahab, Marı́a Gasset, Md. Hafizul Islam, Oumma Halima, Aleena F. Ali, Salmaan M. Shah, Malek Salkini, Saaim Saleemi, Abdullah F Mallah, Ayan Khan, Sohaib Mesiya, Morshed Khandaker, , Nagib Ahsan

This study characterizes parvalbumin isoforms in Hilsa fish using proteomic methods, finding higher PRVB levels in young fish and lower PRVB compared to other freshwater fish.

Journal of Agricultural and Food Chemistry · Nov 17, 2025Peer-reviewedBiochemistry