Author

D. Prakoso

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1

Frequent Co-Authors

L. C. M. Salvador· 2 shared R. Xu· 2 shared S. Rajeev· 2 shared M. Gorman· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersMicrobiology

L. C. M. Salvador

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2 papers

Recent·Most cited

MicrobiologybioRxivMar 29, 2023

Leptospira transcriptome sequencing using long-read technology reveals unannotated transcripts and potential polyadenylation of mRNA molecules

R. Xu, D. Prakoso, L. C. M. Salvador, S. Rajeev

This study uses long-read sequencing to analyze Leptospira transcriptomes, identifying unannotated transcripts and potential polyadenylation, with implications for virulence.

DOI 10.1128/spectrum.02234-23

bacteria (other)long-read sequencing

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MicrobiologybioRxivPreprintJun 16, 2022

Leptospira enrichment culture followed by ONT Nanopore sequencing allows better detection of Leptospira presence and diversity in water and soil samples.

M. Gorman, R. Xu, D. Prakoso…·S. Rajeev

The paper compares methods for detecting Leptospira in environmental samples, finding that enrichment culture followed by PCR or sequencing improves detection of both pathogenic and nonpathogenic Leptospira.

DOI 10.1101/2022.06.16.496521

metagenomicsexperimental assay

𝕏 PostBluesky