Author

Derek Benson

Commonwealth Scientific and Industrial Research Organisation

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Organism:human· 2 Research Focus:differential expression· 1 Organism:E. coli· 1 Approach:machine learning (classical)· 1 Assay:metabolomics· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Alan J. RobertsoniD· 1 shared Andrew C. WardeniD· 1 shared Devika GanesamoorthyiD· 1 shared James Watts· 1 shared John V. PearsoniD· 1 shared Juan Pablo Molina OrtiziD· 1 shared Kaltin FergusoniD· 1 shared Kátia NonesiD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alan J. RobertsonORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintMay 1, 2025

EMMAi: fast enzyme-allocation constraints in GEMs for improved biomass prediction across carbon sources

Juan Pablo Molina Ortiz, Derek Benson, James Watts…·Matthew J. Morgan

EMMAi automates enzyme constraint integration into GEMs using AI-predicted kcat values, improving biomass prediction accuracy across carbon sources without manual curation.

DOI 10.1101/2025.05.01.651607

E. colimouse

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMar 28, 2018

Profiling copy number alterations in cell-free tumour DNA using a single-reference

Alan J. Robertson, Qinying Xu, Sarah Song…·Lachlan Coin

This paper introduces qCNV and sCNA-seq tools to profile somatic copy number alterations in cell-free DNA without a reference panel, showing effectiveness in detecting clinically relevant mutations from plasma samples.

DOI 10.1101/290171

humanwhole-genome sequencing

𝕏 PostBluesky