Author

Elizabeth Tseng

Pacific Biosciences, Menlo Park, CA 94025, USA.Primary ORCID profile (0000-0002-1074-5095 · 24 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Elizabeth TsengiD24 papers · Pacific Biosciences (United States)

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Aishwarya Kulkarni· 1 shared Alex ZelikovskyiD· 1 shared Amit VermaiD· 1 shared Ariel Fromowitz· 1 shared Daniel T. StarczynowskiiD· 1 shared David ShechteriD· 1 shared Davy Lee· 1 shared Diane HeiseriD· 1 shared

Activity by Year

2016-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

Aishwarya Kulkarni

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2 papers

Recent·Most cited

Cancer BiologybioRxivFeb 4, 2024

Broad de-regulated U2AF1 splicing is prognostic and augments leukemic transformation via protein arginine methyltransferase activation

Meenakshi Venkatasubramanian, Leya Schwartz, Nandini Ramachandra…·Nathan Salomonis

The paper identifies a splicing mechanism in AML independent of mutations, showing it drives poor prognosis and can be targeted with PRMT5 inhibition.

DOI 10.1126/scitranslmed.adr1471

humanbulk RNA-seq

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BioinformaticsbioRxivMay 9, 2016

HapIso : An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads

Serghei Mangul, Harry Taegyun Yang, Farhad Hormozdiari…·Eleazar Eskin

HapIso reconstructs haplotype-specific isoforms from long single-molecule reads by clustering reads into parental alleles despite high error rates.

DOI 10.1109/tnb.2017.2675981

long-read sequencingstatistical model

𝕏 PostBluesky