Author

H. Kudoh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 5 Ecology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 4 Assay:bulk RNA-seq· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:development & morphogenesis· 2 Approach:experimental assay· 2 Assay:imaging· 2 Organism:plant (other)· 2

Frequent Co-Authors

J. Sugisaka· 3 shared M. N. Honjo· 3 shared H. Nishio· 2 shared J. Sese· 2 shared J. Sun· 2 shared K. K. Shimizu· 2 shared M. Hatakeyama· 2 shared R. Akiyama· 2 shared

Activity by Year

2019-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersPlant Biology

J. Sugisaka

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Author profile →

6 papers

Recent·Most cited

PlantServation: time-series phenotyping using machine learning revealed seasonal pigment fluctuation in diploid and polyploid Arabidopsis

R. Akiyama, T. Goto, T. Tameshige, J. Sugisaka, K. Kuroki, J. Sun, J. Akita, M. Hatakeyama, H. Kudoh, T. Kenta, A. Tonouchi, Y. Shimahara, J. Sese, N. Kutsuna, R. Shimizu-Inatsugi, K. K. Shimizu

PlantServation uses machine learning to analyze field images and estimate anthocyanin content in Arabidopsis, revealing seasonal fluctuations influenced by environmental factors.

bioRxiv · Nov 21, 2022 · PreprintPlant Biology

Circadian and environmental signal integration in a natural population of Arabidopsis

H. Nishio, D. L. Cano-Ramirez, T. Muranaka, L. L. de Barros Dantas, M. N. Honjo, J. Sugisaka, H. Kudoh, A. Dodd

The paper studies how circadian and environmental signals integrate in Arabidopsis halleri under natural conditions using field data and modeling.

bioRxiv · Sep 10, 2022 · PreprintPlant Biology

Circadian-period variation underlies the local adaptation of photoperiodism in the short-day plant Lemna aequinoctialis.

T. Muranaka, S. Ito, H. Kudoh, T. Oyama

This study shows that variation in the circadian free-running period (FRP) correlates with adaptive photoperiodism traits in Lemna aequinoctialis, linking chronotype variation to local adaptation.

bioRxiv · Mar 9, 2022Ecology

Altered stomatal patterning accompanies a trichome dimorphism in a natural population of Arabidopsis

N. M. Simon, J. Sugisaka, M. N. Honjo, S. Aarseth Tunstad, G. Tunna, H. Kudoh, A. N. Dodd

The paper shows that a natural population of Arabidopsis halleri with trichome dimorphism has differences in stomatal density associated with the trichome presence.

bioRxiv · Jul 28, 2020Plant Biology

Fine-scale ecological and transcriptomic data reveal niche differentiation of an allopolyploid from diploid parents in Cardamine

R. Akiyama, J. Sun, M. Hatakeyama, H. E. L. Lischer, R. V. Briskine, A. Hay, X. Gan, M. Tsiantis, H. Kudoh, M. M. Kanaoka, J. Sese, K. K. Shimizu, R. Shimizu-Inatsugi

This study examines the ecological and transcriptomic differences between an allopolyploid plant and its diploid parents, finding niche differentiation linked to water availability.

bioRxiv · Jun 24, 2020 · PreprintPlant Biology

Seasonal stability and dynamics of DNA methylation in plants in a natural environment

T. Ito, H. Nishio, Y. Tarutani, N. Emura, M. N. Honjo, A. Toyoda, A. Fujiyama, T. Kakutani, H. Kudoh

The paper examines seasonal DNA methylation patterns in Arabidopsis halleri, finding stable methylation in most regions and identifying seasonally methylated cytosines with distinct seasonal dynamics.

bioRxiv · Mar 29, 2019Plant Biology