Author

Hanna Mendes Levitin

Columbia University Irving Medical Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 4 Organism:human· 4 Assay:scRNA-seq· 4 Approach:Bayesian inference· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1

Frequent Co-Authors

Peter A. SimsiD· 4 shared Erin C. BushiD· 2 shared Jeffrey N. BruceiD· 2 shared Jinzhou YuaniD· 2 shared Peter CanolliD· 2 shared Puspa ThapaiD· 2 shared Yim Ling Cheng· 2 shared Anna LasorellaiD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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4 shared papersImmunology

Peter A. SimsORCID

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4 papers

Recent·Most cited

ImmunologybioRxivPreprintFeb 1, 2025

Transcriptional control of T cell tissue adaptation and effector function in infants and adults

Peter Anthony Szabo, Hanna Mendes Levitin, Thomas J. Connors…·Peter A. Sims

This study compares transcriptional profiles of memory T cells in infants and adults to identify age-specific regulatory mechanisms.

2 citations

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GenomicsbioRxivPreprintDec 5, 2023

Consensus scHPF Identifies Cell Type-Specific Drug Responses in Glioma by Integrating Large-Scale scRNA-seq

Hanna Mendes Levitin, Wenting Zhao, Jeffrey N. Bruce…·Peter A. Sims

The paper introduces consensus scHPF, a method to identify robust gene signatures from scRNA-seq data, and applies it to discover cell type-specific drug responses in glioma.

13 citations

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ImmunologybioRxivPreprintFeb 20, 2019

A single-cell reference map for human blood and tissue T cell activation reveals functional states in health and disease

Peter A. Szabo, Hanna Mendes Levitin, Michelle Miron…·Peter A. Sims

DOI 10.1101/555557

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Systems BiologyMolecular Systems BiologyPeer-reviewedFeb 1, 2019

De novo Gene Signature Identification from Single-Cell RNA-Seq with Hierarchical Poisson Factorization

Hanna Mendes Levitin, Jinzhou Yuan, Yim Ling Cheng…·Peter A. Sims

This paper introduces scHPF, a Bayesian method for discovering gene signatures from scRNA-seq without prior normalization, and finds spatially biased expression patterns in glioma regions linked to poor survival.

107 citationstop 4%

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