Author

Yim Ling Cheng

Columbia University Irving Medical Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Immunology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:Bayesian inference· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1

Frequent Co-Authors

Erin C. BushiD· 2 shared Hanna Mendes Levitin· 2 shared Jinzhou YuaniD· 2 shared Peter A. SimsiD· 2 shared Anna LasorellaiD· 1 shared Antonio IavaroneiD· 1 shared David M. BleiiD· 1 shared Deborah J. AndrewiD· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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2 shared papersImmunology

Erin C. BushORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Developmental BiologyGeneticsPeer-reviewedJun 26, 2021

Isoform-specific roles of the Drosophila filamin-type protein Jitterbug (Jbug) during development

SeYeon Chung, Thao Phuong Le, Vishakha Vishwakarma…·Deborah J. Andrew

The paper characterizes Jbug isoforms in Drosophila, showing their differential expression, maternal contribution, and specific roles in actin structures and Crumbs localization.

3 citations

Drosophilaexperimental assay

𝕏 PostBluesky

ImmunologybioRxivPreprintFeb 20, 2019

A single-cell reference map for human blood and tissue T cell activation reveals functional states in health and disease

Peter A. Szabo, Hanna Mendes Levitin, Michelle Miron…·Peter A. Sims

DOI 10.1101/555557

humanscRNA-seq

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Systems BiologyMolecular Systems BiologyPeer-reviewedFeb 1, 2019

De novo Gene Signature Identification from Single-Cell RNA-Seq with Hierarchical Poisson Factorization

Hanna Mendes Levitin, Jinzhou Yuan, Yim Ling Cheng…·Peter A. Sims

This paper introduces scHPF, a Bayesian method for discovering gene signatures from scRNA-seq without prior normalization, and finds spatially biased expression patterns in glioma regions linked to poor survival.

107 citationstop 4%

humanscRNA-seq

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