Author
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5 papers
Recent·Most cited
S. L. Kosakovsky Pond, S. Weaver, D. Callan…·A. Nekrutenko
HyphAeon is a transformer model that accelerates detection of episodic diversifying selection in mammalian genomes and enables new analytical capabilities beyond traditional dN/dS methods.
J. D. Zehr, R. J. Franklin-Guild, S. V. Nguyen…·L. B. Goodman
The paper isolates and characterizes a novel Actinomyces species from abscesses in African giant pouched rats.
J. D. Zehr, S. L. Kosakovsky Pond, J. K. Millet…·M. J. Stanhope
This study identifies natural selection differences in key protein domains between non-pathogenic FECV and pathogenic FIPV FCoVs, highlighting sites under positive selection associated with FIP development.
R. Benndorf, R. Velazquez, J. D. Zehr…·A. G. Lucaci
This study examines the evolutionary forces shaping four sHSPs (HspB1, HspB3, HspB5, HspB8) in vertebrates and links their selective pressures to disease-associated mutations.
J. D. Zehr, S. L. Kosakovsky Pond, D. P. Martin…·M. J. Stanhope
This paper analyzes the evolutionary changes in the spike protein of a Canine Coronavirus isolate, identifying relaxed selection and amino acid substitutions associated with a shift in tropism from enteric to respiratory.