Author

J. H. Vineis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:comparative / phylogenetic analysis· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

J. L. Bowen· 3 shared A. Ganesh· 1 shared A. Giblin· 1 shared A. N. Bulseco· 1 shared B. G. Paul· 1 shared B. Mortazavi· 1 shared C. Calaza· 1 shared C. Romero Santiveri· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersEcology

J. L. Bowen

Mutual co-authors in cluster

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3 papers

Recent·Most cited

EcologybioRxivPreprintJun 8, 2023

Diversity at single nucleotide to pangenome scales among sulfur cycling bacteria in salt marshes

S. Perez Castro, E. L. Peredo, O. Mason…·Z. Cardon

This study characterizes sulfur-cycling microbial diversity in salt marshes using metagenomics, revealing genomic variation across sites and plant species.

DOI 10.1101/2023.06.08.544202

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 21, 2023

Machined silicon traps for capturing novel bacterial communities and strains in-situ

C. Romero Santiveri, J. H. Vineis, S. Martins…·E. D. Goluch

The paper tests a silicon nanopore device for isolating microbial taxa from anaerobic sediments, showing it can culture diverse bacterial communities and generate novel genomes.

DOI 10.1101/2023.02.21.529475

bacteria (other)metagenomics

𝕏 PostBluesky

EcologybioRxivPreprintAug 24, 2021

Microbial dark carbon fixation fueled by nitrate enrichment

J. H. Vineis, A. N. Bulseco, J. L. Bowen

The paper investigates how nitrate enrichment in coastal marine sediments supports microbial dark carbon fixation (DCF) through sulfur oxidizing denitrification, revealing niche partitioning and genomic adaptations in salt marsh sediments.

DOI 10.1101/2021.08.24.457596

metagenomicscomparative / phylogenetic analysis

𝕏 PostBluesky