Author

J. Pullman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Aboumohamed· 1 shared A. Tischer· 1 shared Acclerating Medicine Partnership (AMP)· 1 shared B. A. Gartrell· 1 shared B. Goilav· 1 shared C. Putterman· 1 shared D. Prinster· 1 shared E. Der· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperCancer Biology

A. Aboumohamed

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Author profile →

3 papers

Recent·Most cited

Detailed Social Network Interactions and Gut Microbiome Strain-Sharing Within Isolated Honduras Villages

J. Pullman, F. Beghini, M. Alexander, S. Vishnempet Shridhar, D. Prinster, I. L. Brito, N. A. Christakis

The paper investigates how social network interactions influence microbiome composition in isolated Honduran villages using social network and microbiome sequencing data.

Nature · Jan 2, 2025Peer-reviewedMicrobiology

Functional succinate dehydrogenase deficiency and loss of ascorbic acid transporter SLC23A1 are pathognomonic adverse features of clear cell renal cancer

R. K. Aggarwal, Y. Zou, R. A. Luchtel, K. Pradhan, N. Ashai, N. Ramachandra, J. Albanese, J.-i. Yang, X. Wang, S. Aluri, S. Gordon, V. Machha, A. Tischer, A. Aboumohamed, B. A. Gartrell, , N. Shenoy

This paper identifies functional succinate dehydrogenase deficiency and loss of SLC23A1 as common adverse features in clear cell renal cell carcinoma, with implications for diagnosis and treatment.

bioRxiv · Jul 5, 2020Cancer Biology

Insights from Comparison of the Renal and Skin Single Cell Transcriptomes in Lupus Nephritis

E. Der, H. Suryawanshi, P. Morozov, M. Kustagi, B. Goilav, S. Ranabathou, P. Izmirly, R. Clancy, H. M. Belmont, M. Koenigsberg, M. Mokrzycki, H. Rominieki, J. Graham, J. Rocca, N. Bornkamp, , C. Putterman

This study uses scRNA-seq to analyze renal and skin biopsies from lupus nephritis patients, identifying IFN signatures and fibrotic pathways associated with disease heterogeneity and non-response.

bioRxiv · Dec 31, 2019 · PreprintImmunology