Author

J.-H. Yu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Plant Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:clustering· 2 Research Focus:differential expression· 2 Organism:fungi (other)· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2

Frequent Co-Authors

H.-S. Park· 2 shared Y.-E. Son· 2 shared A. Rokas· 1 shared B. Jiang· 1 shared C. Ku· 1 shared C. M. McCarthy· 1 shared C.-C. Tung· 1 shared C.-E. Huang· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersMicrobiology

H.-S. Park

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Population genomics of Aspergillus sojae is shaped by the food environment

K. L. Acevedo, E. Eaton, S. Zhao, K. Chacon-Vargas, C. M. McCarthy, D. Choi, J.-H. Yu, J. G. Gibbons

This study examines how long-term use of Aspergillus sojae in soy fermentation shaped its population structure, genome variation, and phenotypic traits, revealing reduced genetic diversity and loss of aflatoxin production.

bioRxiv · Sep 7, 2023 · PreprintEvolutionary Biology

The novel spore-specific regulator SscA governs Aspergillus conidiogenesis.

Y.-E. Son, J.-H. Yu, H.-S. Park

This study identifies SscA as a spore-specific transcription factor that regulates conidial formation, integrity, and function in Aspergillus species through transcriptomic analyses.

bioRxiv · May 24, 2023 · PreprintMicrobiology

Single-cell transcriptomics unveils xylem cell development and evolution

C.-C. Tung, S.-C. Kuo, C.-L. Yang, C.-E. Huang, J.-H. Yu, Y.-H. Sun, P. Shuai, J.-C. Su, C. Ku, Y.-C. J. Lin

This study uses single-cell transcriptomics to analyze xylem cell development and evolution across four angiosperms, revealing conserved and variable lineage patterns.

bioRxiv · Oct 16, 2021Plant Biology

Transcriptomic, protein-DNA interaction, and metabolomic studies of VosA, VelB, and WetA in Aspergillus nidulans asexual spores

M.-Y. Wu, M. E. Mead, M.-K. Lee, G. F. Neuhaus, D. A. Adpressa, J. I. Martien, Y.-E. Son, H. Moon, D. Amador-Noguez, K.-H. Han, A. Rokas, S. Loesgen, J.-H. Yu, H.-S. Park

The paper investigates the regulatory roles of VosA, VelB, and WetA in asexual spore formation in Aspergillus nidulans using transcriptomic, protein-DNA interaction, and metabolomic analyses.

bioRxiv · Sep 9, 2020Microbiology

NINJA-Associated ERF19 Negatively Regulates Arabidopsis Pattern-Triggered Immunity

P.-Y. Huang, J. Zhang, B. Jiang, J.-H. Yu, Y.-P. Lu, K. Chung, L. Zimmerli

This study identifies ERF19 as a negative regulator of PTI in Arabidopsis, showing that NINJA represses ERF19 to fine-tune immune responses against pathogens.

bioRxiv · Aug 23, 2017Plant Biology