Author

Johanna F. Semmelink

Amsterdam UMC Location University of Amsterdam

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Lisa G. M. van BaarseniD· 3 shared Cristoforo GrassoiD· 2 shared Tineke Anna de JongiD· 2 shared Aldo JongejaniD· 1 shared Catarina Gago de GraçaiD· 1 shared Chaja M. J. van Ansenwoude· 1 shared Ester B. M. RemmerswaaliD· 1 shared Janna E. G. RoetiD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersCell Biology

Lisa G. M. van BaarsenORCID

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3 papers

Recent·Most cited

Cell BiologyEuropean Journal of ImmunologyPeer-reviewedJun 1, 2025

Identification and mapping of human lymph node stromal cell subsets by combining single-cell RNA sequencing with spatial transcriptomics.

Cristoforo Grasso, Janna E. G. Roet, Catarina Gago de Graça…·Lisa G. M. van Baarsen

The paper identifies and maps human lymph node stromal cell subsets using scRNA-seq and spatial transcriptomics, revealing their spatial distribution and potential interactions with lymphocytes.

14 citations

humanscRNA-seq

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Cell BiologyClinical & Experimental ImmunologyPeer-reviewedJan 1, 2025

Senescence phenotype of lymph node stromal cells from patients with rheumatoid arthritis is partly restored by dasatinib treatment

Tineke Anna de Jong, Johanna F. Semmelink, Janne W. Bolt…·Lisa G. M. van Baarsen

This study identifies senescent features in lymph node stromal cells from RA patients and shows that dasatinib treatment partially reverses these features.

8 citations

humanbulk RNA-seq

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Molecular BiologybioRxivPreprintJul 12, 2024

Identification of stable reference genes for quantitative real-time PCR in human fibroblasts from lymph nodes and synovium

Sajede Rasouli, Chaja M. J. van Ansenwoude, Johanna F. Semmelink…·Tineke Anna de Jong

This study identifies stable reference genes for RT-qPCR normalization in human fibroblasts from lymph nodes and synovium under different experimental conditions.

1 citation

humanbulk RNA-seq

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