Author

K. Dholakia

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biophysics· 4 Cell Biology· 2 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:imaging· 7 Research Focus:cell type annotation· 3 Approach:deep learning· 3 Research Focus:dimensionality reduction· 3 Approach:microscopy & imaging analysis· 3 Organism:mouse· 3 Approach:experimental assay· 2 Research Focus:imputation· 2

Frequent Co-Authors

J. Nylk· 3 shared P. Wijesinghe· 3 shared A. Escobet-Montalban· 2 shared D. J. X. Chow· 2 shared F. Gasparoli· 2 shared G. O. Dwapanyin· 2 shared K. Dunning· 2 shared S. Corsetti· 2 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersCell Biology

J. Nylk

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

UVA hyperspectral light-sheet microscopy for volumetric metabolic imaging: application to pre-implantation embryo development

J. Morizet, D. Chow, P. Wijesinghe, E. Schartner, G. O. Dwapanyin, N. Dubost, G. D. Bruce, E. Anckaert, K. Dunning, K. Dholakia

This paper introduces a UVA hyperspectral light-sheet microscopy method to map metabolic activity in 3D, demonstrating its application to pre-implantation embryo development.

bioRxiv · Jun 21, 2023 · PreprintBiophysics

Investigation of refractive index dynamics during embryo development using digital holographic microscopy

G. O. Dwapanyin, D. J. X. Chow, T. C. Y. Tan, N. S. Dubost, J. M. Morizet, K. R. Dunning, K. Dholakia

This study uses digital holographic microscopy to track refractive index changes in mouse embryos, linking them to lipid content and embryo health.

bioRxiv · Apr 17, 2023 · PreprintBiophysics

High throughput hemogram of T cells using digital holographic microscopy and deep learning

R. K. Gupta, N. Hempler, G. Malcolm, K. Dholakia, S. J. Powis

This study uses digital holographic microscopy and deep learning to classify CD4+ and CD8+ T cells with high throughput and accuracy.

bioRxiv · Dec 23, 2021Immunology

Experimentally unsupervised deconvolution for light-sheet microscopy with propagation-invariant beams

P. Wijesinghe, S. Corsetti, D. J. X. Chow, S. Sakata, K. Dunning, K. Dholakia

This paper introduces a deep learning deconvolution method for light-sheet microscopy using propagation-invariant beams, trained with physics-based images and unpaired data, achieving improved image contrast without requiring extensive paired training data.

bioRxiv · May 26, 2021Biophysics

Widefield light sheet microscopy using an Airy beam combined with deep-learning super-resolution

S. Corsetti, P. Wijesinghe, P. B. Poulton, S. Sakata, K. Vyas, C. S. Herrington, J. Nylk, F. Gasparoli, K. Dholakia

This paper introduces a method combining an Airy beam and deep-learning super-resolution to enhance resolution and field of view in light-sheet microscopy, demonstrating improvements in imaging biological samples.

bioRxiv · Feb 27, 2020Biophysics

Multi-photon attenuation-compensated light-sheet fluorescence microscopy

M. Veettikazhy, J. Nylk, F. Gasparoli, A. Escobet-Montalban, A. K. Hansen, D. Marti, P. E. Andersen, K. Dholakia

This paper introduces a method to improve depth penetration in multi-photon light-sheet fluorescence microscopy using a graded neutral density filter, benchmarked against a spatial light modulator system.

bioRxiv · Dec 12, 2019Cell Biology

Three-photon light-sheet fluorescence microscopy

A. Escobet-Montalban, F. M. Gasparoli, J. Nylk, P. Liu, Z. Yang, K. Dholakia

This paper demonstrates three-photon light-sheet fluorescence microscopy, enhancing penetration depth using Bessel beams for imaging cellular spheroids.

bioRxiv · Aug 17, 2018Cell Biology