Author

K. Zarringhalam

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 4

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 4 Assay:bulk RNA-seq· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:ATAC-seq· 1 Organism:bacteria (other)· 1 Approach:experimental assay· 1

Frequent Co-Authors

M.-J. Gubbels· 3 shared Y. Rezvani· 3 shared C. D. Keroack· 2 shared A. Arriojas· 1 shared A. Farrell· 1 shared A. Paul· 1 shared A. Vajdi Hoojghan· 1 shared B. Elsworth· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

M.-J. Gubbels

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Single cell expression and chromatin access of the Toxoplasma gondii lytic cycle identifies AP2XII-8 as an essential pivotal controller of a ribosome regulon

J. Lou, Y. Rezvani, A. Arriojas, D. Degras, C. D. Keroack, M. Duraisingh, K. Zarringhalam, M.-J. Gubbels

The paper maps transcriptional and chromatin changes during the Toxoplasma gondii lytic cycle, identifying AP2XII-8 as a key regulator of a ribosome regulon.

bioRxiv · Oct 6, 2023 · PreprintMicrobiology

High-resolution small RNAs landscape provides insights into alkane adaptation in the marine alkane-degrader Alcanivorax dieselolei B-5

G. Wei, S. Li, S. Ye, Z. Wang, K. Zarringhalam, J. He, W. Wang, Z. Shao

This study identifies sRNA candidates in Alcanivorax dieselolei B-5 under alkane and non-alkane conditions, revealing their roles in alkane metabolism and adaptation.

bioRxiv · Nov 9, 2022 · PreprintMicrobiology

Babesia divergens egress from host cells is orchestrated by essential and druggable kinases and proteases

B. Elsworth, C. D. Keroack, Y. Rezvani, J. A. Tennessen, S. A. Sack, A. Paul, C. K. Moreira, M.-J. Gubbels, K. Zarringhalam, M. T. Duraisingh

This study identifies essential kinases and proteases involved in Babesia divergens egress and invasion, suggesting potential drug targets.

bioRxiv · Feb 17, 2022 · PreprintMicrobiology

The extracellular milieu of Toxoplasma-s lytic cycle drives lab-adaptation and promotes changes in lipid metabolism primarily driven by transcriptional reprogramming

V. A. Primo, Y. Rezvani, A. Farrell, A. Vajdi Hoojghan, G. T. Marth, K. Zarringhalam, M.-J. Gubbels

This study uses evolve and resequence to identify genetic changes in Toxoplasma gondii during lab-adaptation, revealing transcriptional reprogramming and lipid metabolism shifts.

bioRxiv · Mar 9, 2021 · PreprintMicrobiology