Author

Nuo Xu

Center for Excellence in Molecular Cell Science

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2 Assay:proteomics· 2 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Ai TianiD· 1 shared Brett TrostiD· 1 shared Chaoying Long· 1 shared Craig A. SmibertiD· 1 shared Elizabeth RadleyiD· 1 shared Ellie Hogan· 1 shared Fatima Naimi· 1 shared Howard D. LipshitziD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Ai TianORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Long-read proteogenomic atlas of human neuronal differentiation reveals isoform diversity informing neurodevelopmental risk mechanisms

Nuo Xu, Katherine M Rynard, Elizabeth Radley, Ai Tian, Maahil Arshad, Chaoying Long, Jimmy Ly, Hua Luo, Ellie Hogan, Maria Eleni Fafouti, Melanie Davie, Fatima Naimi, Yun Li, John A. Calarco, Brett Trost, , Shreejoy J. Tripathy

The paper generates a high-resolution proteogenomic atlas of human neuronal development using long-read RNA sequencing and proteomics, revealing novel isoforms and their role in neurodevelopmental risk mechanisms.

Nature Communications · Aug 19, 2026Peer-reviewedBioinformatics

Lineage recording reveals hijacked hepatic progenitor states as a common origin of HCC and ICC

Jinyong Fan, Jiazheng Pei, Nuo Xu, Xiaoyun Wang, Xiaoyun Wang, Shiyu Mao, Yu Zhang, Lisi Yu, Yingxia Sun, Yeqing Gong, Xinyuan Xiong, Shu Wang, Lin Li, Zhen Shao, Xuxu Sun, , Xin Liu

The paper uses CERAMIC to trace liver tumor initiation, identifying Hep_Bi-zonal cells as the origin of HCC and ICC and revealing peroxisomal metabolism and macrophage niches as key factors.

bioRxiv · Jul 30, 2026 · PreprintCancer Biology

Helminth-remodeled microbial indole-3-lactic acid drives AhR-dependent disease tolerance

Ruohang Sun, Yi Liu, Yue Wang, Nuo Xu, Xiaoxiao Ma, Qingbo Lv, Xiufeng Zhao, Isabelle Vallée, Pascal Boireau, Zeming Wu, M Y Liu, Xiaolei Liu, Xuemin Jin

This study shows helminth infection remodels gut microbiota to produce ILA, which activates AhR to promote immune tolerance and reduce inflammation in viral infections.

bioRxiv · May 8, 2026 · PreprintImmunology