Author

P. Castaldi

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Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1

Frequent Co-Authors

A. Boueiz· 1 shared A. Masoomi· 1 shared C. P. Hersh· 1 shared E. K. Silverman· 1 shared J. Dy· 1 shared M. Cho· 1 shared S. Lee· 1 shared T. Zhao· 1 shared

Activity by Year

2020-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

A. Boueiz

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1 paper

Recent·Most cited

Improved Prediction of Smoking Status via Isoform-Aware RNA-seq Deep Learning Models

Z. Wang, A. Masoomi, Z. Xu, A. Boueiz, S. Lee, T. Zhao, M. Cho, C. P. Hersh, E. K. Silverman, J. Dy, P. Castaldi

The paper develops deep learning models using RNA-seq data that incorporate isoform and exon information to improve smoking status prediction, achieving higher AUC than gene-level models.

bioRxiv · Sep 9, 2020 · PreprintGenomics