P. Q. Tran

This study compares viral communities from viromes and metagenomes across diverse environments, showing method choice affects ecological interpretation and recommending both approaches for comprehensive analysis.

The paper examines how seasonal anoxia affects viral and microbial biogeochemical cycling in a freshwater lake using metagenomic and metatranscriptomic data.

This study investigates opsin gene diversity, distribution, and expression in freshwater lakes, finding that opsin abundance correlates with lake optical properties and DOC levels, and highlights the role of rhodopsin-based phototrophy in clearwater lakes.

This study links sulfur metabolism in deep-sea hydrothermal plumes to microbial biogeography and biogeochemical cycling using genomic data from 37 plumes across 8 ocean basins.

The paper identifies environmental predictors of electroactive bacterioplankton in small boreal lakes by analyzing EET genes and their correlation with DOM.

This study identifies bacteria in oxic freshwater lakes that produce hydrogen sulfide through cysteine degradation, revealing a new pathway for sulfur cycling in oxygenated environments.

This study uses depth-discrete metagenomics to reveal microbial roles in biogeochemical cycling in Lake Tanganyika's anoxic waters.

This study identifies a broader phylogenetic and metabolic diversity of microbial mercury methylators using genome-resolved metagenomics and metatranscriptomics.

The paper characterizes novel marine Proteobacteria from hydrothermal vents using multi-omics, revealing their metabolic diversity and environmental adaptation strategies.