Modified dN/dS for accounting transition and transversion frequency difference and non-sense substitution in genomes
R. Aziz, P. Sen, P. K. Beura, M. Dash, N. D. Namsa, R. C. Deka, D. Das, E. Feil, S. S. Satapathy, S. K. Ray
The paper modifies the dN/dS ratio calculation to account for transition/transversion rate differences and non-sense substitutions, showing higher dN/dS values in E. coli and S. enterica genes.
bioRxiv · Jan 22, 2022 · PreprintEvolutionary Biology