Author

E. Feil

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Evolutionary Biology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Assay:whole-genome sequencing· 3 Organism:bacteria (other)· 2 Research Focus:chromatin & epigenetic regulation· 2 Assay:DNA methylation· 2 Organism:E. coli· 2 Approach:experimental assay· 2 Assay:metagenomics· 2

Frequent Co-Authors

N. Coyle· 2 shared N. D. Namsa· 2 shared P. K. Beura· 2 shared P. Sen· 2 shared R. Aziz· 2 shared S. K. Ray· 2 shared S. S. Satapathy· 2 shared A. Dowling· 1 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersMicrobiology

N. Coyle

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Author profile →

7 papers

Recent·Most cited

Antimicrobial effects, and selection for AMR by non-antibiotic drugs on bacterial communities

A. Hayes, L. Zhang, E. Feil, B. Kasprzyk-Hordern, J. Snape, W. H. Gaze, A. K. Murray

This study assesses the antimicrobial effects and AMR selection potential of non-antibiotic drugs on bacterial communities using metagenomic and metatranscriptomic analyses.

bioRxiv · Apr 23, 2024Microbiology

Synonymous and non-synonymous transitions/transversions vividly disclose purifying selection in Escherichia coli coding sequences

P. K. Beura, R. Aziz, P. Sen, S. Das, N. D. Namsa, E. Feil, S. S. Satapathy, S. K. Ray

The paper develops a method to estimate the ti/tv ratio in E. coli coding sequences by accounting for codon degeneracy and pretermination codons, revealing insights into purifying selection.

bioRxiv · Nov 3, 2022 · PreprintEvolutionary Biology

Modified dN/dS for accounting transition and transversion frequency difference and non-sense substitution in genomes

R. Aziz, P. Sen, P. K. Beura, M. Dash, N. D. Namsa, R. C. Deka, D. Das, E. Feil, S. S. Satapathy, S. K. Ray

The paper modifies the dN/dS ratio calculation to account for transition/transversion rate differences and non-sense substitutions, showing higher dN/dS values in E. coli and S. enterica genes.

bioRxiv · Jan 22, 2022 · PreprintEvolutionary Biology

Recent mixing of Vibrio parahaemolyticus populations

C. Yang, X. Pei, Y. Wu, L. Yan, Y. Yan, Y. Song, N. Coyle, J. Martinez-Urtaza, C. Quince, Q. Hu, M. Jiang, E. Feil, D. Yang, Y. Song, D. Zhou, , Y. Cui

The paper analyzes genomic data from 1,103 Vibrio parahaemolyticus isolates to show recent genetic mixing among four populations due to increased human-mediated dispersal.

bioRxiv · Jan 19, 2019Microbiology

Using the Wax moth larva Galleria mellonella infection model to detect emerging bacterial pathogens

R. Hernandez, E. Hesse, A. Dowling, N. Coyle, E. Feil, W. Gaze, M. Vos

The paper uses the Galleria mellonella infection model to identify novel bacterial pathogens in coastal environments, revealing new strains with potential public health risks.

bioRxiv · Oct 13, 2018Microbiology

Gene composition as a potential barrier to large recombinations in the bacterial pathogen Klebsiella pneumoniae

F. Comandatore, D. Sassera, S. C. Bayliss, E. Scaltriti, S. Gaiarsa, X. Cao, A. Gales, R. Saito, S. Pongolini, S. Brisse, E. Feil, C. Bandi

This study analyzes 834 Klebsiella pneumoniae genomes to investigate the frequency, distribution, and dynamics of large recombination events, finding that gene composition influences the success of such events.

bioRxiv · Jan 28, 2018Evolutionary Biology

The Distribution of Bacterial Doubling Times in the Wild

B. Gibson, D. Wilson, E. Feil, A. Eyre-Walker

The paper estimates bacterial doubling times in the wild by comparing mutation rates and accumulation rates across species, finding wild doubling times are much longer and vary widely.

bioRxiv · Nov 6, 2017Microbiology