S. B. Busi

This study shows that the ketogenic diet reduces colorectal tumors in mice by altering the gut microbiome to increase stearic acid, which suppresses cancer cell growth and immune responses.

The paper predicts and characterizes protein functions in Methanobrevibacter smithii using sequence and structure data, identifying gut-specific proteins and potential horizontal gene transfer events.

The paper examines cross-domain interactions in proglacial stream biofilms, showing that specific taxa contribute to community stability despite environmental gradients.

This study identifies increased virulence factors and antimicrobial resistance genes in the gut microbiome of COVID-19 patients, suggesting heightened infective competence.

This study compares the fecal microbiome of mice from two U.S. suppliers using multi-omics approaches, revealing supplier-specific functional differences and novel metagenome-assembled genomes.

This study shows that biofilm-forming Desulfovibrio vulgaris Hildenborough colonizes rat colons and reduces adenoma development, while biofilm-deficient strains do not persist and increase mucin expression.

This study examines AMR and BGCs in glacier-fed stream biofilms, finding diverse resistance genes and biosynthetic clusters across bacteria and eukaryotes.

The paper analyzes meta-omic data from a wastewater treatment plant to show how different antimicrobial resistance genes are disseminated via plasmids or phages, with some categories showing exclusive or primary dissemination routes.

This study identifies genomic and metabolic adaptations of biofilms in glacier-fed streams that enable them to exploit ecological windows of opportunity under harsh conditions.

The paper evaluates short-read, long-read, and hybrid metagenomic assembly methods on complex samples and proposes a reference-independent approach using multi-omic integration for microbiome analysis.

The paper shows that homogeneous selection drives microdiversity in glacier-fed stream microbiomes, with implications for microbial diversity under climate change.

The paper uses multi-omics analyses to show how gut microbiota influence metabolome and transcriptome changes linked to colon cancer susceptibility in rats.