Author

S. Effgen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

A. Pecinka· 1 shared B. Huettel· 1 shared B. Usadel· 1 shared C. Camilleri· 1 shared C. J. Underwood· 1 shared F. Liu· 1 shared H. J. Schouten· 1 shared I. Gy· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperEvolutionary Biology

A. Pecinka

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Author profile →

2 papers

Recent·Most cited

A gap-free tomato genome built from complementary PacBio and Nanopore long DNA sequences reveals extensive linkage drag during breeding

W. M. J. van Rengs, M. H.- W. Schmidt, S. Effgen, Y. Wang, M. W. A. M. Zaidan, B. Huettel, H. J. Schouten, B. Usadel, C. J. Underwood

The paper uses long-read sequencing to assemble a complete tomato genome, revealing linkage drag from a wild species during breeding.

bioRxiv · Aug 30, 2021Plant Biology

The evolutionary dynamics of genetic incompatibilities introduced by duplicated genes in Arabidopsis thaliana

W.-B. Jiao, V. Patel, J. Klasen, F. Liu, P. Pecinkova, M. Ferrand, I. Gy, C. Camilleri, S. Effgen, M. Koornneef, A. Pecinka, O. Loudet, K. Schneeberger

The paper identifies genetic incompatibilities from duplicated genes in Arabidopsis thaliana using GWAS and natural population data, showing how these incompatibilities coexist and are mitigated by additional gene copies.

bioRxiv · Sep 21, 2020Evolutionary Biology