Author

S. Lopes

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:plant (other)· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

T. K. Anderson· 2 shared A. Heintz-Buschart· 1 shared A. L. Vincent· 1 shared A. L. Vincent Baker· 1 shared A. Pekosz· 1 shared A. Rachmat· 1 shared B. Sam· 1 shared C. C. Laczny· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersMicrobiology

T. K. Anderson

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Antigenic and genetic diversity of H1 and H3 influenza A viruses in swine in Brazil

S. Lopes, T. K. Anderson, R. Schaefer, C. Tochetto, D. Gava, M. E. Cantao, J. R. Ciacci-Zanella, A. L. Vincent Baker, N. S. Lewis

This study characterizes the genetic and antigenic diversity of H1 and H3 influenza A viruses in Brazilian swine from 2010-2018, identifying distinct lineages and antigenic variation with implications for vaccine development.

bioRxiv · Dec 1, 2023 · PreprintMicrobiology

Antigenic characterization and pandemic risk assessment of North American H1 influenza A viruses circulating in swine

D. Venkatesh, T. K. Anderson, J. B. Kimble, J. Chang, S. Lopes, C. K. Souza, A. Pekosz, K. Shaw-Saliba, R. E. Rothman, K.-F. Chen, N. Lewis, A. L. Vincent

This study assesses the antigenic and genetic diversity of swine H1 influenza A viruses in North America to evaluate pandemic risk.

bioRxiv · May 4, 2022Microbiology

Field efficacy of guppies and pyriproxyfen (Sumilarv(R) 2MR) combined with community engagement on dengue vectors in Cambodia: a randomized controlled trial

J. C. Hustedt, D. Doum, V. Keo, S. Ly, B. Sam, V. Chan, N. Alexander, J. Bradley, M. Liverani, D. B. Prasetyo, A. Rachmat, M. Shafique, S. Lopes, L. Rithea, J. Hii

This study evaluates the effectiveness of guppies and pyriproxyfen combined with community engagement in reducing dengue vector populations in Cambodia, finding significant reductions in adult female Aedes density.

bioRxiv · May 15, 2020Ecology

PathoFact: A pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data

L. de Nies, S. Lopes, A. Heintz-Buschart, C. C. Laczny, P. May, P. Wilmes

PathoFact predicts virulence factors and antimicrobial resistance genes in metagenomic data with high accuracy and specificity, and identifies signature genes differentiating disease and control groups.

bioRxiv · Mar 24, 2020Microbiology