Author

Sean E. Corbett

Boston University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:clustering· 2 Organism:human· 2 Assay:scRNA-seq· 2 Research Focus:batch correction / integration· 1 Approach:Bayesian inference· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1

Frequent Co-Authors

Joshua David CampbelliD· 2 shared Masanao YajimaiD· 2 shared Shiyi YangiD· 2 shared William Evan JohnsoniD· 2 shared Yusuke KogaiD· 2 shared Zhe WangiD· 2 shared Conor V. SheaiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Joshua David CampbellORCID

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2 papers

Recent·Most cited

BioinformaticsNAR Genomics and BioinformaticsPeer-reviewedJul 9, 2022

Celda: A Bayesian model to perform co-clustering of genes into modules and cells into subpopulations using single-cell RNA-seq data

Zhe Wang, Shiyi Yang, Yusuke Koga…·Joshua David Campbell

Celda identifies transcriptional modules and cell subpopulations in scRNA-seq data, outperforming existing methods in detecting biological programs and cell types.

49 citations

humanscRNA-seq

𝕏 PostBluesky

BioinformaticsGenome biologyPeer-reviewedMar 5, 2020

Decontamination of ambient RNA in single-cell RNA-seq with DecontX

Shiyi Yang, Sean E. Corbett, Yusuke Koga…·Joshua David Campbell

DecontX is a Bayesian method to remove ambient RNA contamination in scRNA-seq data, improving cell cluster separation and marker gene accuracy.

635 citationstop 1%

mousehuman

𝕏 PostBluesky