Author

Shigeo Otake

Okayama University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioengineering· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:development & morphogenesis· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:organoid / primary culture· 1

Frequent Co-Authors

Takeshi TakaradaiD· 2 shared Tatsunori Osone· 2 shared Tomoka TakaoiD· 2 shared Hiroomi OkuyamaiD· 1 shared Kazuhiro YamamotoiD· 1 shared Koichi Deguchi· 1 shared Ryosuke IwaiiD· 1 shared Shojiro HanakiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Takeshi TakaradaORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsBriefings in BioinformaticsPeer-reviewedJan 1, 2026

SGCRNA: Spectral Clustering-Guided Co-Expression Network Analysis Without Scale-Free Constraints for Multi-Omic Data

Tatsunori Osone, Tomoka Takao, Shigeo Otake, Takeshi Takarada

SGCRNA improves upon WGCNA by removing scale-free constraints and parameter tuning, offering a more flexible co-expression network analysis for multi-omic data.

DOI 10.1093/bib/bbag021

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioengineeringbioRxivPreprintJun 5, 2025

Scaffold-free cryopreservable cartilage grafts obtained from hiPSC-derived chondroprogenitor cells for airway reconstruction with growth adaptability

Shojiro Hanaki, Tomoka Takao, Yuki Fujisawa…·Takeshi Takarada

This study develops scaffold-free, cryopreservable cartilage grafts from hiPSC-derived cells for tracheal reconstruction, showing growth adaptability and superior performance in animal models.

DOI 10.1101/2025.06.05.654989

rathuman

𝕏 PostBluesky