Author

Sumithra Sankararaman

Washington University in St. Louis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Organism:mouse· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Robi David MitraiD· 2 shared Aldrin Kay‐Yuen YimiD· 1 shared Arnav MoudgiliD· 1 shared Avinash RamuiD· 1 shared Briana C. PrageriD· 1 shared Christopher A. MaheriD· 1 shared Denis R. AveyiD· 1 shared Douglas R. AdkinsiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersGenomics

Robi David MitraORCID

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Author profile →

3 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedMar 22, 2023

RegTools: Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer

Kelsy C. Cotto, Yang-Yang Feng, Avinash Ramu…·Malachi Griffith

RegTools identifies splice-associated variants in cancer by integrating genomic and transcriptomic data across 9,000 tumor samples, discovering 235,778 splicing events.

131 citationstop 1%

humanwhole-genome sequencing

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GenomicsProceedings of the National Academy of SciencesPeer-reviewedApr 13, 2021

Brd4-bound enhancers drive cell intrinsic sex differences in glioblastoma

Najla Kfoury, Zongtai Qi, Briana C. Prager…·Joshua B. Rubin

This study identifies sex differences in glioblastoma driven by Brd4-bound enhancers, showing opposing responses to BET inhibitors in male and female tumor cells.

40 citations

mousehuman

𝕏 PostBluesky

NeurosciencebioRxivPreprintApr 24, 2018

Single cell RNAseq uncovers a robust transcriptional response to morphine by oligodendrocytes

Denis R. Avey, Sumithra Sankararaman, Aldrin Kay‐Yuen Yim…·Jeffrey Milbrandt

This study identifies morphine-induced gene expression changes in oligodendrocytes using single-cell RNA sequencing in mice, highlighting pathways related to myelination.

2 citations

mousescRNA-seq

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