Author

T. N. Nielsen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:host-pathogen & immune response· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

L. M. Lui· 2 shared A. E. Kazakov· 1 shared A. M. Deutschbauer· 1 shared A. P. Arkin· 1 shared B. A. Adler· 1 shared C. Zhong· 1 shared E. Kutter· 1 shared H. Carion· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMicrobiology

L. M. Lui

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2 papers

Recent·Most cited

MicrobiologybioRxivJun 30, 2023

Decomposing a San Francisco Estuary microbiome using long read metagenomics reveals species and species- and strain-level dominance from picoeukaryotes to viruses

L. M. Lui, T. N. Nielsen

This study decomposes a San Francisco Estuary metagenome using long-read sequencing to estimate microbial diversity and identify dominant species and strains across multiple taxa.

DOI 10.1128/msystems.00242-24

long-read sequencingmetagenomics

𝕏 PostBluesky

MicrobiologyMicrobiologyPeer-reviewedDec 1, 2021

The Genetic Basis of phage susceptibility, cross-resistance and host-range in Salmonella

B. A. Adler, A. E. Kazakov, C. Zhong…·A. P. Arkin

This study identifies 301 host factors in Salmonella involved in phage resistance, reveals cross-resistance mechanisms between RpoS and RpoN, and shows additional constraints define phage host range.

DOI 10.1099/mic.0.001126

bacteria (other)whole-genome sequencing

𝕏 PostBluesky