BioinformaticsbioRxiv
Evolution of genes neighborhood within reconciled phylogenies: an ensemble approach
Cedric Chauve, Yann Ponty, Joao Paulo Peirera Zanetti
The paper extends the DeCo algorithm to sample evolutionary scenarios under a Boltzmann distribution and applies it to mammalian gene trees, reducing syntenic conflicts in ancestral adjacencies.
DOI 10.1186/1471-2105-16-s19-s6