Isaac Ellmen

This paper introduces FlashABB, a model that predicts antibody structures faster than sequence embedding models, enabling efficient access to 3D information for antibody stability and developability prediction.

LICHEN generates light-chain antibody sequences conditioned on heavy chains and experimental needs, producing valid, diverse, and functional sequences.

The paper evaluates nine computational tools for identifying SARS-CoV-2 lineages in wastewater sequencing data using simulated samples, finding most tools reliably detect lineages above 5% frequency.

The paper develops a tiled-amplicon sequencing assay to detect and track ToBRFV in municipal wastewater, revealing its widespread distribution in Ontario, Canada.