Panuwat Trairatphisan

This study builds gene co-expression networks from rat kidney toxicogenomics data and integrates them into a web tool to improve safety assessment and biomarker identification for drug development.

The paper applies a causal network tool to toxicogenomics data to infer regulatory networks in drug-induced liver injury, identifying conserved pathways between rat and human models.

The paper introduces updates to CellNOpt, a tool for building logic models from perturbation data and prior knowledge networks, including new methods and an interactive interface.

CARNIVAL identifies upstream causal processes from gene expression data by integrating prior knowledge, improving accuracy over existing tools in IgA nephropathy analysis.