Author

Kaitlin Chaung

Stanford UniversityORCID 0000-0002-0397-1430Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2 Genomics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Organism:human· 2 Assay:scRNA-seq· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Julia SalzmaniD· 4 shared George HendersoniD· 3 shared Peter Lincoln WangiD· 3 shared Tavor Z. BaharaviD· 3 shared Ivan N. ZheludeviD· 2 shared Roozbeh DehghannasiriiD· 2 shared Elisabeth A. MeyeriD· 1 shared Rob BiermaniD· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

4 shared papersGenomics

Julia SalzmanORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

GenomicsCellPeer-reviewedDec 1, 2023

SPLASH: a statistical, reference-free genomic algorithm unifies biological discovery

Kaitlin Chaung, Tavor Z. Baharav, George Henderson…·Julia Salzman

SPLASH is a unifying, statistically driven approach to biological discovery from raw sequencing data, bypassing alignment.

24 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintJul 17, 2023

SPLASH: a statistical, reference-free genomic algorithm unifies biological discovery

Kaitlin Chaung, Tavor Z. Baharav, George Henderson…·Julia Salzman

The paper was withdrawn due to duplicate posting and is no longer available for citation.

DOI 10.1101/2023.07.17.549408

𝕏 PostBluesky

BioinformaticsbioRxivPreprintDec 6, 2022

Unsupervised reference-free inference reveals unrecognized regulated transcriptomic complexity in human single cells

Roozbeh Dehghannasiri, George Henderson, Rob Bierman…·Julia Salzman

SPLASH+ identifies novel transcriptomic diversity in human single cells without reference genomes or cell type metadata.

6 citations

𝕏 PostBluesky

BioinformaticsGenome biologyPeer-reviewedOct 25, 2022

ReadZS detects cell type-specific and developmentally regulated RNA processing programs in single-cell RNA-seq

Elisabeth A. Meyer, Kaitlin Chaung, Roozbeh Dehghannasiri, Julia Salzman

ReadZS identifies cell type-specific and developmentally regulated RNA processing programs in single-cell RNA-seq without relying on pre-existing annotations.

13 citations

humanArabidopsis

𝕏 PostBluesky