Kyle A. O’Connell

ClaroAI-Bench evaluates AI agents' ability to reproduce computational findings from biomedical papers by testing data findability, accessibility, code availability, environment reconstructability, and results reproducibility.

This study evaluates the reliability of iNaturalist photos for phenotyping Plethodon salamanders, finding weak geographic signals in continuous traits but stronger results for discrete traits using classifiers.

The paper estimates higher-level phylogenetic networks in Desmognathus salamanders to uncover complex hybridization patterns and ecomorphological speciation mechanisms.

This study benchmarks NVIDIA Parabricks, a GPU-accelerated software suite, showing significant speedups for germline variant calling and cost savings on cloud platforms.