Author

Jorge Almagro

The Francis Crick InstituteORCID 0000-0002-0652-6447Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:imaging· 1 Organism:mouse· 1

Frequent Co-Authors

Agathe ChaigneiD· 1 shared Axel BehrensiD· 1 shared Christopher W. DunsbyiD· 1 shared Guillaume SalbreuxiD· 1 shared Hugh SparksiD· 1 shared Matthew B. SmithiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Agathe ChaigneORCID

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1 paper

Recent·Most cited

BioinformaticsBiophysical JournalPeer-reviewedMar 30, 2023

Active mesh and neural network pipeline for cell aggregate segmentation

Matthew B. Smith, Hugh Sparks, Jorge Almagro…·Guillaume Salbreux

The paper introduces a segmentation pipeline combining neural networks and active meshes to segment and track cells in 3D time-lapse images of organoids and stem cells.

8 citations

mouseimaging

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