Mark A.A. Minow

The paper uses single-cell sequencing to show that Id1 regulates flowering in maize by affecting chromatin remodeling and gene expression, with a genetic interaction between Id1 and Te1 that delays flowering.

This study identifies cell-type-specific regulatory variation in maize hybrids, showing how chromatin accessibility changes contribute to heterosis by reducing cell-type specificity.

This study characterizes the soybean root response to cyst nematode infection using single-cell multi-omic profiling, identifying key transcription factors involved in syncytium formation and immune suppression.

Easy-Multiome enables joint profiling of gene expression and chromatin accessibility in plant single cells with high efficiency and minimal workflow changes.

The paper identifies a coffee TFL1 ortholog with alternate splicing that represses flowering in Arabidopsis, suggesting a role in asynchronous flowering in coffee.

The paper identifies trans-regulatory variants associated with chromatin accessibility in maize hybrids, revealing their role in heterosis and gene expression.

The paper uses single-cell ATAC-seq to show ZmWUS1 overexpression alters chromatin accessibility in maize inflorescence meristem, revealing its role in stem cell maintenance through context-dependent regulation.

The paper constructs a single-cell chromatin accessibility atlas in rice and compares it across grass species to study the evolution of cell-type-specific cis-regulatory elements.

The paper identifies cell-type-specific cis-regulatory variants in maize using single-cell genomics and population genetics, revealing their role in local adaptation and flowering.

The paper constructs a spatially resolved multiomic single-cell atlas of soybean development, identifying cell types, chromatin regions, and gene regulatory networks involved in growth and nitrogen fixation.