Author

Farshad Nassiri

University of TorontoORCID 0000-0002-0797-3425Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:deconvolution· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Gelareh Mohammed ZadehiD· 2 shared Akash J. PateliD· 1 shared Carolina Angelica ParadaiD· 1 shared Chengxiang QiuiD· 1 shared Collin William EnglishiD· 1 shared Damian A. Almiron Bonnin· 1 shared David Ronan RaleighiD· 1 shared Eric C. HollandiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Gelareh Mohammed ZadehORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 11, 2025

Deconvolution of Sample Identity in Single-Cell RNA Sequencing via Genome Imputation

Rohit Ghosh, Rupert Hugh-White, Farshad Nassiri…·Paul Christopher Boutros

The paper introduces a method to assign single-cell RNA-seq data to donor-of-origin without prior genetic information, achieving high concordance in tumor-derived data.

DOI 10.1101/2025.02.11.637700

humanscRNA-seq

𝕏 PostBluesky

Cancer BiologyCell GenomicsPeer-reviewedMay 23, 2024

Meningioma transcriptomic landscape demonstrates novel subtypes with regional associated biology and patient outcome.

H. Nayanga Thirimanne, Damian A. Almiron Bonnin, Nicholas Nuechterlein…·Eric C. Holland

This study combines bulk RNA-Seq datasets to create a transcriptomic landscape of meningiomas, identifies subtypes with distinct biology and prognosis, and provides an interactive tool for outcome prediction.

37 citationstop 1%

humanbulk RNA-seq

𝕏 PostBluesky