Author

Alexandra L. McCorkindale

Harvard UniversityORCID 0000-0002-0840-0784Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Chinmay J. Shukla· 2 shared Rafael A. IrizarryiD· 2 shared Chiara GerhardingeriD· 1 shared David M ShechneriD· 1 shared Irmtraud M. MeyeriD· 1 shared Irwin JungreisiD· 1 shared John L. RinniD· 1 shared Keegan D. KorthaueriD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

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10 top collaborators · 30 mutual co-author links

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2 shared papersDevelopmental Biology

Chinmay J. Shukla

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2 papers

Recent·Most cited

Developmental BiologyDevelopmentPeer-reviewedMar 15, 2019

A gene expression atlas of embryonic neurogenesis in Drosophila reveals complex spatiotemporal regulation of lncRNAs.

Alexandra L. McCorkindale, Philipp Wahle, Sascha Werner…·Robert P. Zinzen

The paper creates a spatiotemporal gene expression atlas of Drosophila embryonic neurogenesis, revealing dynamic lncRNA expression patterns and cell type-specific gene regulation.

30 citations

Drosophilabulk RNA-seq

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GenomicsThe EMBO JournalPeer-reviewedJan 15, 2018

High-throughput identification of RNA nuclear enrichment sequences

Chinmay J. Shukla, Alexandra L. McCorkindale, Chiara Gerhardinger…·John L. Rinn

The paper identifies RNA sequences responsible for nuclear enrichment in lncRNAs using a modified MPRA approach and validates findings with smRNA-FISH.

122 citationstop 2%

humanbulk RNA-seq

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