Author

Caroline Bournaud

Lyon 1 UniversitéORCID 0000-0002-2980-1691Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Molecular Biology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Étienne DanchiniD· 2 shared Sebastian Eves‐van den AkkeriD· 2 shared Alwéna Tollec· 1 shared Arthur PéréiD· 1 shared Christophe BrueliD· 1 shared Clément PellegriniD· 1 shared François GilletiD· 1 shared Ines Tguafaiti· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMolecular Biology

Étienne DanchinORCID

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3 papers

Recent·Most cited

PathologybioRxivPreprintOct 17, 2026

A miniaturized Arabidopsis thaliana - Botrytis cinerea seedling pathosystem and the GreenDayz workflow for longitudinal image-based phenotyping

Ines Tguafaiti, Christophe Bruel, Mathias Choquer…·François Gillet

DOI 10.64898/2026.10.11.758349

Arabidopsisimaging

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Molecular BiologybioRxivPreprintJul 2, 2025

DNA-protein interactions in Meloidogyne incognita

Caroline Bournaud, Alwéna Tollec, Étienne Danchin…·Sebastian Eves‐van den Akker

This paper develops an optimized dCas9-based CAPTURE method for studying DNA-protein interactions in the nematode Meloidogyne incognita, identifying chromatin-associated proteins involved in effector gene regulation.

DOI 10.1101/2025.07.02.662738

experimental assay

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GenomicsGenesPeer-reviewedMay 18, 2021

Genome expression dynamics reveals parasitism regulatory landscape of the root-knot nematode Meloidogyne incognita and a promoter motif associated with effector genes

Martine Da Rocha, Caroline Bournaud, Julie Dazenière…·Étienne Danchin

The paper analyzes the spatio-temporal gene expression of Meloidogyne incognita across its life stages and identifies a conserved promoter motif associated with effector genes.

52 citationstop 4%

bulk RNA-seqstatistical model

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