Jack Wadden

This paper develops a single-molecule system to detect and monitor plasma nucleosomes and oncoproteins in Diffuse Midline Glioma patients, showing clinical utility for non-invasive diagnostics.

RawMap is a fast and accurate classifier for filtering non-target reads in real-time nanopore sequencing, improving efficiency and reducing costs.

This paper introduces Threshold Sequencing and LAMPrey to enable ultra-rapid somatic variant detection in under 30 minutes using real-time sequencing and targeted amplification.

SquiggleNet classifies nanopore signals in real time with high accuracy, outperforming traditional methods in speed and memory usage.

The paper introduces an optimized data structure for read alignment, improving performance while maintaining accuracy.