Author
University of MichiganORCID 0000-0002-2832-458XUnclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Juechu Dong, Xueshen Liu, Harisankar Sadasivan…·Satish Narayanasamy
mm2-gb accelerates Minimap2's chaining step on GPU, improving performance for long DNA reads without sacrificing accuracy.
Harisankar Sadasivan, Daniel Stiffler, Ajay Tirumala…·Satish Narayanasamy
DTWax optimizes the sDTW algorithm for GPU to improve sequencing speed and compute efficiency in nanopore sequencing.
Harisankar Sadasivan, Milos Maric, Eric T. Dawson…·Satish Narayanasamy
The paper accelerates Minimap2 for long read alignment on GPUs by optimizing the chaining step, achieving significant speedup and cost reduction.
Harisankar Sadasivan, Jack Wadden, Kush Goliya…·Satish Narayanasamy
RawMap is a fast and accurate classifier for filtering non-target reads in real-time nanopore sequencing, improving efficiency and reducing costs.