Author

Bingyu Zhao

Virginia TechORCID 0000-0002-5392-0279Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Pathology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

Bin XuiD· 1 shared Bingchao WuiD· 1 shared Carlos Toro· 1 shared Changhe Zhou· 1 shared Dan Luo· 1 shared Daniel G. S. CapellutoiD· 1 shared Furong SuniD· 1 shared Haidong YaniD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Bin XuORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintJan 2, 2026

Integrative analysis of papain-like cysteine proteases and cystatins reveals stress-dependent regulatory modules in Arabidopsis thaliana

Shuchi Wu, Xing Yi, Song Li, Bingyu Zhao

The paper integrates expression and inhibition data to identify stress-dependent PLCP-cystatin regulatory modules in Arabidopsis thaliana.

DOI 10.64898/2025.12.31.697236

Arabidopsisbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintAug 26, 2024

Haplotype-resolved genome assembly of upland switchgrass provides insights into cold tolerance

Bingchao Wu, Dan Luo, Yuesen Yue…·Linkai Huang

This study presents a haplotype-resolved genome of upland switchgrass and identifies genetic factors associated with cold tolerance through multi-omics analysis.

2 citations

plant (other)whole-genome sequencing

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PathologybioRxivPreprintDec 2, 2023

Xanthomonas euvesicatoria effector XeAvrRxo1 triggers a Rxo1-mediated defense response in Nicotiana benthamiana and its chaperone Xe4429 functions as an antitoxin, an expression repressor, and an enhancer of XeAvrRxo1 secretion

Zhibo Wang, Changhe Zhou, Tiffany G. Roach…·Bingyu Zhao

This study identifies XeAvrRxo1 as a virulence and avirulence effector in X. euvesicatoria and shows that its chaperone Xe4429 suppresses toxicity, represses expression, and enhances secretion of XeAvrRxo1.

DOI 10.1101/2023.12.02.569727

bacteria (other)experimental assay

𝕏 PostBluesky