Steffen U. Pauls

The paper identifies opsin sequences in 25 caddisfly species, finds LW opsins are most diverse, SW opsins are lost in half the species, and UV opsins are single-copy except in one species with colorful wing patterns.

This study uses phylogenomic data to reconstruct the evolutionary history of caddisflies, finding that portable case-making evolved independently in three lineages.

The paper analyzes repetitive elements across 601 insect species, revealing challenges in repeat annotation and the benefits of long-read sequencing.

The paper characterizes the primary structure of h-fibroin across caddisfly suborders, finding conserved termini and variable repeating modules linked to silk mechanical properties.

The paper reveals extensive allelic variation in silk genes across insect and spider species using long-read sequencing, highlighting convergent patterns in structural protein-coding genes.

This study uses HiFi long-read sequencing to assemble repetitive heavy fibroin genes in moth and caddisfly genomes, demonstrating its effectiveness for such challenging regions.

The paper analyzes 601 insect genome assemblies, highlighting taxonomic bias, assembly quality, and the impact of long-read sequencing technologies on contiguity.

The paper reports the first long-read de novo genome assemblies of two tube case-making caddisflies, revealing substantial repetitive element expansion contributing to larger genome sizes compared to annulipalpian species.