Author
Franjo Ivankovic
Broad InstituteORCID 0000-0002-6776-8626Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2017-2026 · peak 4/yrCo-Author Collaboration Network
10 top collaborators · 21 mutual co-author linksMutual co-authors in cluster
8 papers
Recent·Most cited
- Genetic & Genomic MedicinemedRxivPreprintDOI 10.64898/2026.09.30.26364416
- Genetic & Genomic MedicinemedRxivPreprint
A 515,579-Genome Reference Panel Improves Rare-Variant Imputation Across Multiple Underrepresented Populations
Franjo Ivankovic, Arthur Ko, Mary Morgan Taylor…·Lee Lichtenstein
The paper presents a large reference panel of 515,579 genomes to improve rare-variant imputation across underrepresented populations, enhancing accuracy for variants with frequencies as low as 0.002%.
DOI 10.64898/2026.08.25.26361247 - BioinformaticsBioinformaticsPeer-reviewed
MarkerMatch: A Proximity-Based Probe-Matching Algorithm for Joint Analysis of Copy-Number Variants from Different Genotyping Arrays
Franjo Ivankovic, Dongmei Yu, James Zhijian Shen…·Carol A. Mathews
MarkerMatch improves CNV detection sensitivity across genotyping arrays by matching probes based on proximity, outperforming consensus probe methods.
DOI 10.1093/bioinformatics/btag341 - Genetic & Genomic MedicinemedRxivPreprint
Genome-Wide Association Analysis of Tic Disorders Reveals 6 Independent Risk Loci and Highlights Tic-Associated Cell Types and Brain Circuitry
Dongmei Yu, Nora I. Strom, Zachary F. Gerring…·Pablo Mir
This study identifies six genome-wide significant risk loci for tic disorders and links genetic risk to specific brain cell types and circuits.
2 citations - NeurosciencebioRxivPreprint
Distinct patterns of de novo coding variants contribute to Tourette Syndrome etiology
Lingyu Zhan, Dongmei Yu, Franjo Ivankovic…·Roel A. Ophoff
This study identifies distinct rare de novo coding variants associated with Tourette Syndrome, highlighting loss-of-function mutations and novel candidate genes.
2 citations - GeneticsbioRxivPreprint
The landscape of gene loss and missense variation across the mammalian tree informs on gene essentiality
Calwing Liao, Robert Ye, Franjo Ivankovic…·Benjamin M. Neale
This paper introduces GISMO and GISMO-mis metrics to quantify gene loss and missense variation across mammals, identifying essential genes and improving gene-disease associations.
- BioinformaticsDatabasePeer-reviewed
RBPMetaDB: A comprehensive annotation of mouse RNA-Seq datasets with perturbations of RNA-binding proteins
Jin Li, Su-Ping Deng, Jacob Vieira…·Peng Yu
RBPMetaDB compiles and organizes 278 mouse RNA-Seq datasets perturbed by 163 RNA-binding proteins, revealing unexplored proteins and enriched DNA-binding activities.
5 citations - BioinformaticsDatabasePeer-reviewed
SFMetaDB: A Comprehensive Annotation of Mouse RNA Splicing Factor RNA-Seq Datasets
Jin Li, Ching-San Tseng, Antonio Federico…·Peng Yu
SFMetaDB curates RNA-Seq datasets for mouse splicing factors, revealing a gap in functional studies and highlighting understudied factors.
12 citations