Author

Joanna L. Parish

National Institute for Health and Care Research (NIHR) Birmingham Biomedical Research Centre, Oxford, UKORCID 0000-0002-7111-4211Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Christy Susan VargheseiD· 2 shared Csilla VárnaiiD· 2 shared Jack FergusoniD· 2 shared Adam T. GrundhoffiD· 1 shared Andrea MagriiD· 1 shared Andrew David BeggsiD· 1 shared Boris NoyvertiD· 1 shared C. David Wood· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersMicrobiology

Christy Susan VargheseORCID

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2 papers

Recent·Most cited

MicrobiologyPLoS PathogensPeer-reviewedJan 27, 2025

Repression of CADM1 transcription by HPV type 18 is mediated by three-dimensional rearrangement of promoter-enhancer interactions

Karen Campos-León, Jack Ferguson, Thomas Günther…·Joanna L. Parish

This study shows that HPV18 infection reprograms host transcription by altering CTCF binding and promoter-enhancer interactions, leading to repression of the tumor suppressor CADM1.

3 citations

humanbulk RNA-seq

𝕏 PostBluesky

MicrobiologybioRxivSep 6, 2023

CTCF regulates hepatitis B virus cccDNA chromatin topology

Mihaela Olivia Dobrica, Christy Susan Varghese, James Michael Harris…·Jane A. McKeating

This study shows that CTCF regulates HBV cccDNA chromatin topology and nucleosomal positioning, affecting viral transcription.

DOI 10.1099/jgv.0.001939

humanATAC-seq

𝕏 PostBluesky