Seamus J. Holden

micromorph is a Python toolkit for measuring bacterial morphology from light microscopy data, offering accurate and flexible analysis with a documented API and napari plugin.

The paper uses atomic force microscopy to study how MAC pores in E. coli lead to mechanical destabilization of the cell envelope, causing lysis through inner membrane permeation.

ZeroCostDL4Mic provides a platform to use deep learning in microscopy, enabling tasks like segmentation and denoising through Google Colab.