Author

Defne G. Ozgulbas

University of Illinois Urbana-ChampaignORCID 0000-0002-7316-3922Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Organism:virus· 2 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Approach:large language model· 1 Assay:structural biology· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexander BraceiD· 1 shared Animashree AnandkumariD· 1 shared Arash VahdatiD· 1 shared Arvind RamanathaniD· 1 shared Austin ClydeiD· 1 shared Bharat KaleiD· 1 shared Bin ZhangiD· 1 shared Carla M. ManniD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alexander BraceORCID

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2 papers

Recent·Most cited

BiophysicsStructurePeer-reviewedDec 19, 2025

Probing the Role of Membrane in Neutralizing Activity of Antibodies Against Influenza Virus

Defne G. Ozgulbas, Timothy J.C. Tan, Po-Chao Wen…·Emad Tajkhorshid

This study shows that antibodies against influenza virus neutralize by interacting with the viral membrane, and disrupting these interactions reduces their effectiveness.

1 citation

virusstructural biology

𝕏 PostBluesky

BioinformaticsThe International Journal of High Performance Computing ApplicationsPeer-reviewedOct 27, 2023

GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics.

Maxim Zvyagin, Alexander Brace, Kyle Hippe…·Arvind Ramanathan

GenSLMs use large language models to analyze SARS-CoV-2 genomes, enabling rapid identification of variants of concern and providing insights into evolutionary dynamics.

121 citationstop 1%

viruswhole-genome sequencing

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