Author

Jackson Tonnies

University of WashingtonORCID 0000-0002-7564-9037Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Organism:Arabidopsis· 2 Research Focus:cell type annotation· 2 Assay:ChIP-seq· 2 Assay:DNA methylation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

Christine QueitschiD· 3 shared Josh T. CuperusiD· 3 shared Nicholas A. MuethiD· 3 shared Stanley FieldsiD· 3 shared Tobias JoresiD· 3 shared Ajith AnandiD· 1 shared Andrés RomanowskiiD· 1 shared Bing YangiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersPlant Biology

Christine QueitschORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintApr 29, 2026

Massively parallel characterization and deep learning of enhancers in plant genomes

Tobias Jores, Nicholas A. Mueth, Sayeh Gorjifard…·Christine Queitsch

The paper characterizes plant enhancer activity across multiple species and develops a deep learning model to predict enhancer strength and identify functional motifs.

1 citation

Arabidopsismouse

𝕏 PostBluesky

Plant BiologyThe Plant CellPeer-reviewedApr 11, 2025

Small DNA elements that act as both insulators and silencers in plants

Tobias Jores, Nicholas A. Mueth, Jackson Tonnies…·Christine Queitsch

The paper identifies small DNA elements in plants that function as both insulators and silencers depending on regulatory context, validated in multiple plant species.

18 citationstop 4%

Arabidopsiszebrafish

𝕏 PostBluesky

Plant BiologyThe Plant CellPeer-reviewedMar 21, 2024

Cooperativity and additivity in plant enhancers

Tobias Jores, Jackson Tonnies, Nicholas A. Mueth…·Christine Queitsch

This study investigates how plant enhancers integrate transcription factor activity, finding both cooperative and additive interactions in light-responsive enhancers.

37 citationstop 4%

plant (other)ChIP-seq

𝕏 PostBluesky