Author
Yinjun Jia
Center for Life SciencesORCID 0000-0002-8281-0669Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2021-2026 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 34 mutual co-author links6 papers
Recent·Most cited
- BioinformaticsCellPeer-reviewed
Atom-level generative foundation model for molecular interaction with pockets
Xingang Peng, Ruihan Guo, Fenglin Guo…·Jianzhu Ma
This paper introduces PocketXMol, a generative foundation model for molecular interactions with protein pockets, achieving state-of-the-art performance in 11 tasks and demonstrating success in designing inhibitors and peptides.
22 citationstop 1% - BioinformaticsSciencePeer-reviewed✦ In-depth digest
Deep contrastive learning enables genome-wide virtual screening
Yinjun Jia, Bowen Gao, Jiaxin Tan…·Yanyan Lan
DrugCLIP, a contrastive dense-retrieval model for pockets and molecules, beats docking on DUD-E and LIT-PCBA and screened about 10,000 human AlphaFold2 proteins in 24 hours.
67 citationstop 1% - BioinformaticsbioRxivPreprint
How Good is AlphaFold3 at Ranking Drug Binding Affinities?
Xin Hong, Bowen Gao, Yinjun Jia…·Yanyan Lan
This study evaluates AlphaFold3-derived models for drug binding affinity ranking, showing they outperform existing methods and require fewer resources.
3 citations - NeuroscienceeLifePeer-reviewed
Selfee: Self-supervised Features Extraction of animal behaviors
Yinjun Jia, Shuaishuai Li, Xuan Guo…·Wei Zhang
Selfee extracts comprehensive and discriminative features from raw animal behavior videos using self-supervised learning, enabling anomaly detection and temporal analysis.
- NeurosciencebioRxivPreprint
Molecular Mechanisms for Frequency Specificity in a Drosophila Hearing Organ
Yufei Hu, Yinjun Jia, Tuantuan Deng…·Wei Zhang
The paper identifies molecular mechanisms for frequency specificity in Drosophila hearing by showing Brv1 and Pzl in lch5 neurons mediate specific frequency ranges, with Piezo2 function conserved across species.