João Raimundo

This study identifies gene regulatory modules involved in Antirrhinum flower shape development by analyzing gene expression patterns along developmental axes and boundaries.

The paper uses optogenetic control of Bicoid to study gap gene regulation dynamics in embryos, revealing both known and novel regulatory relationships.

DeepArk uses deep learning to model cis-regulatory codes in four model species, accurately predicting regulatory features and variant impacts.

This study shows that the nuclear to cytoplasmic ratio regulates zygotic transcription in Drosophila through multiple mechanisms, independent of cell cycle length.