Author

Aaron D. Hernday

University of California, MercedORCID 0000-0002-9351-7150Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:C. elegans· 2 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Organism:yeast· 1

Frequent Co-Authors

Clarissa J. NobileiD· 2 shared Ana SubotićiD· 1 shared Celia Lobo Romero· 1 shared Craig L. EnnisiD· 1 shared Dimitrios SofrasiD· 1 shared Hans CarolusiD· 1 shared Jeffrey M. RybakiD· 1 shared Jordan C. RozumiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMicrobiology

Clarissa J. NobileORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintJan 9, 2025

A comparative evaluation of CRISPR-Cas9 allele editing systems in Candida auris: challenging research in a challenging bug

Dimitrios Sofras, Hans Carolus, Ana Subotić…·Patrick Van Dijck

This study compares four CRISPR-Cas9 systems for genome editing in Candida auris, finding significant differences in efficiency and integration patterns.

1 citation

C. elegansexperimental assay

𝕏 PostBluesky

Systems BiologyPLoS Computational BiologyPeer-reviewedAug 22, 2023

Inferring gene regulatory networks using transcriptional profiles as dynamical attractors

Ruihao Li, Jordan C. Rozum, Morgan M. Quail…·Aaron D. Hernday

This paper develops an ODE-based GRN inference method using dynamic transcriptional data and validates it on synthetic yeast and Candida albicans GRNs.

6 citations

yeastC. elegans

𝕏 PostBluesky