Author

Giovanna Bergamini

GlaxoSmithKline (Germany)ORCID 0000-0002-9662-9502Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2 Assay:proteomics· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Marcus BantscheffiD· 2 shared Maria Faelth-SavitskiiD· 2 shared Nils KurzawaiD· 2 shared Thilo WerneriD· 2 shared Ania RutkowskaiD· 1 shared Anna Rutkowska· 1 shared Bianca Heller· 1 shared Christian TischeriD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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2 shared papersSystems Biology

Marcus BantscheffORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 16, 2025

iss-nf: A Nextflow-based end-to-end in situ sequencing decoding workflow

Nima Vakili, Sebastián González-Tirado, Nils Kurzawa…·Luís A. Vale-Silva

The paper introduces iss-nf, a Nextflow-based workflow for analyzing in situ sequencing data, demonstrating its effectiveness on multiple datasets.

DOI 10.1101/2025.10.16.682795

𝕏 PostBluesky

Systems BiologybioRxivPreprintAug 15, 2023

Integration of Thermal Proteome Profiling with phosphoproteomic and transcriptomic data via mechanistic network models decodes the molecular response to PARP inhibition

Mira Lea Burtscher, Stephan Gade, Martín Garrido‐Rodríguez…·Julio Sáez-Rodríguez

The paper integrates Thermal Proteome Profiling with phosphoproteomic and transcriptomic data using network models to uncover molecular responses to PARP inhibition in ovarian cancer.

DOI 10.1101/2023.08.15.553354

humanproteomics

𝕏 PostBluesky

Cell BiologybioRxivPreprintDec 20, 2018

Proteome thermal stability reflects organ physiology and identifies drug-target engagement in vivo

Jessica Perrin, Thilo Werner, Nils Kurzawa…·Giovanna Bergamini

This study introduces tissue-TPP and blood-CETSA to measure proteome thermal stability, revealing organ physiology and drug-target engagement in vivo.

DOI 10.1101/500306

mouseproteomics

𝕏 PostBluesky